Package 'nghiaagentrutils'

Title: Convenient Bioinformatics Functions (One Line, Title Case)
Description: Convenient bioinformatics functions for @nghiaagent. Contains mapping to make MSigDB Hallmark gene sets names more readable.
Authors: Nghia Nguyen [aut, cre]
Maintainer: Nghia Nguyen <[email protected]>
License: CC BY 4.0
Version: 0.0.1
Built: 2026-05-22 08:19:55 UTC
Source: https://github.com/nghiaagent/nghiaagentrutils

Help Index

Nicely format MSigDB Hallmark gene set names.

Description

American spelling, sentence case, Greek characters included.

Usage

recode_msigdbh(msigdbh_names)

Arguments

msigdbh_names

A vector of MSigDB Hallmark gene set names from MSigDB H GMT files to be formatted.

Value

A character vector of formatted MSigDB Hallmark gene set names.

Examples

x <- c(
  "HALLMARK_ADIPOGENESIS",
  "HALLMARK_G2M_CHECKPOINT",
  "HALLMARK_IL6_JAK_STAT3_SIGNALING"
)
recode_msigdbh(x)